Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015906973.1_cds_XP_016457120.1_50881
CDS Infomation

[gene=LOC107781010] [db_xref=GeneID:107781010] [protein=glycine dehydrogenase (decarboxylating), mitochondrial] [protein_id=XP_016457120.1] [location=join(37882..39108,39441..39686,39779..39856,39942..40042,40122..40317,40409..40534,41029..41214,41295..41408,41980..42132,42268..42456,42607..42684,42773..42898,43004..43102,43210..43327,44754..44848)] [gbkey=CDS]
Sequence

ATGGACCGTGCTAGAAAATTGGCAAACAGAGCAATTCTGAAACGCTTGGTTTCAGAATCA
AAACAGAGCCGTGCTAATGATATCCCATCATCTGCAGCATTATACAGACCTTCAAGGTAT
GTTTCTTCATTGTCACCTTACATATTTCAGGCTAGAAATGGTAAGAATATGTTGCATGGA
AATGGTAATTTCAATAAGCAACATGTTAGATCAATATCTGTTGAGGCACTGAAGCCAAGT
GACACTTTCCCAAGGCGACACAACTCAGCCACCCCACAAGAACAAACCCAAATGGCTGAG
TTTTGTGGTTTTTCAAGCCTTGATTCCCTTATTGATGCCACTGTCCCTCAATCTATTCGT
ATTGAATCCATGAAGTTTTCTAAGTTTGATGAGGGATTAACTGAGGCACAAATGATTGAG
CACATGTCCAAATTAGCCTCAATGAATAAGGTTTTCAAGTCATATATTGGGATGGGATAT
TATAACACTTTTGTACCACCTGTTATTTTGAGGAATATTATGGAGAATCCTGCTTGGTAT
ACTCAGTATACTCCTTATCAGGCTGAGATTTCGCAGGGACGTCTCGAGTCCCTGCTTAAT
TATCAGACCATGATTACAGATCTTACTGGTTTGCCAATGTCCAATGCATCTTTACTAGAT
GAAGGGACCGCGGCAGCTGAGGCTATGGCCATGTGTAATAATATTTTCAAGGGGAAAAAG
AAAACTTTCCTTATTGCTAGCAATTGTCACCCTCAGACTATCGATATTTGTAAGACTAGA
GCTGATGGATTTGGGATTAAGGTAGAGACTGTTGATCTTAAGGACATTGATTATAAATCT
GGTGATGTTTGTGGGGTACTAGTTCAGTATCCGGGAACTGAAGGTGAAATCTTGGATTAT
GGGGAGTTTATTAAGAATGCACATGCTCATGGAGTGAAGGTTGTTATGGCGTCTGATCTT
TTGGCCTTGACAATGTTGAAACCACCCGGTGAACTCGGAGCGGATATTGTTGTTGGTTCT
GCTCAGAGGTTTGGAGTGCCTATGGGTTATGGTGGCCCTCATGCGGCTTTCTTGGCCACT
TCTCAAGAATACAAGAGAATGATGCCCGGAAGAATTATTGGTGTCAGTGTTGATTCTTCA
GGGAAACCCGCTCTCCGTATGGCAATGCAGACCAGGGAACAACACATCCGCAGGGACAAG
GCTACAAGCAACATTTGCACAGCACAGGCCTTGCTTGCGAACATGGCTGCCATGTATGCT
GTCTATCACGGACCGGAGGGGCTAAAAACCATTGCCCAACGTGTTCATGGTCTTGCCGGA
ACGCTTGCTGCCGGGGTCAAAAAGATAGGAACAGTAGAAGTTCAGGATCTTCCATTCTTT
GACACTGTGAAGGTTAAGTGTGCTGATGCAAAAGCAATTGCTGATGTTGCTTACAAGAAT
GAAATTAACTTGAGGGTTGTGGACAACAATACTATAACTGTATCTTTTGATGAAACTACT
ACCTTAGAAGACGTGGACAATCTATTTAAAGTATTTGCCTTGGGAAAGCCAGTCACGTTC
ACTGCTCAATCAATTGCCCAAGAAGTCGAGAATCTGATTCCTTCTGGACTTGTAAGGGAG
ACTCCATATTTGACTCACCAAATATTCAACTCGTACCATACTGAGCACGAGTTGCTGAGA
TACCTTCATAAGCTGCAATCGAAGGACCTTTCCCTGTGCCATAGCATGATTCCTTTGGGA
TCCTGCACAATGAAATTGAATGCCACAACAGAGATGATGCCAGTGACATGGCCTAACTTC
ACAAATATTCACCCTTTTGCACCCACCGAACAGGCTGCTGGCTATCAGGAAATGTTCAAA
GATTTGGGTGACCTATTGTGTACAATTACAGGTTTTGATTCCTTCTCCTTGCAGCCTAAT
GCTGGTGCTGCTGGAGAATATGCTGGGCTGATGGTTATTCTTGCCTATCATATGGCGAGG
GGTGACCATCACCGCAATGTGTGCATCATTCCTGTGTCAGCTCACGGAACAAATCCTGCA
AGTGCTGCTATGTGTGGGATGAAAATTGTTGCTGTTGGAACCGATGCCAAAGGAAACATT
AATATTGAAGAGTTGAGGAAGGCTGCTGAGGCAAATAAGGATAAACTTGCTGCTCTCATG
GTTACATACCCATCAACACATGGAGTCTATGAGGAAGGAATCGATGAGATATGTAAGATA
ATCCATGACAATGGTGGTCAGGTGTACATGGATGGAGCTAACATGAATGCTCAGGTTGGT
CTGACAAGTCCCGGCTTTATCGGTGCTGATGTTTGTCATCTAAATCTACATAAGACATTC
TGCATTCCTCATGGTGGAGGAGGTCCTGGAATGGGTCCCATTGGTGTGAAGAAGCACCTT
GCACCATTTTTGCCATCACACCCTGTGGTTCCTACTGGAGGGATCCCATCCCCCGACAAG
AGTCAGCCACTTGGTACTATTTCTGCTGCACCCTGGGGTTCAGCACTTATTTTGCCGATT
TCATATACCTACATTGCCATGATGGGGTCTAAGGGACTTACAGATGCATCAAAGATAGCT
ATCCTAAATGCAAACTACATGGCTAAGCGTTTGGAGAAGCACTACCCAGTTCTATTCCGA
GGTGTCAATGGAACATGTGCCCATGAGTTTATCATTGACCTGAGGGGCTTTAAGAATACT
GCTGGAATAGAACCTGAAGATGTTGCTAAACGTCTTATAGACTATGGATTCCATGGACCT
ACAATGTCTTGGCCAGTTCCTGGTACACTTATGATTGAACCTACCGAAAGTGAAAGCAAG
GCGGAACTAGACAGGTTTTGTGATGCACTCATCTCCATCAGAGAAGAAATCGCTCAGATT
GAGAAAGGGAATGCTGATATTAACAACAATGTTCTTAAGGGGGCTCCTCATCCACCGTCA
ATGCTCATGGCAGATGCATGGGTAAAACCATATTCTCGGGAATATGCTGCATTCCCTGCT
CCCTGGCTGAGGAATGCCAAATTCTGGCCAACTACAGCACGAGTGGACAATGTGTATGGC
GATCGCAACCTGATCTGCACCCTTCTTCCAGTATCACAAATGGTGGAAGAAGAAGCTGCA
GCAAATGCTTAA

Peptide Sequence

PEP ID

XP_016457120.1
PEP Infomation

PREDICTED: glycine dehydrogenase (decarboxylating), mitochondrial [Nicotiana tabacum]
Sequence

MDRARKLANRAILKRLVSESKQSRANDIPSSAALYRPSRYVSSLSPYIFQARNGKNMLHG
NGNFNKQHVRSISVEALKPSDTFPRRHNSATPQEQTQMAEFCGFSSLDSLIDATVPQSIR
IESMKFSKFDEGLTEAQMIEHMSKLASMNKVFKSYIGMGYYNTFVPPVILRNIMENPAWY
TQYTPYQAEISQGRLESLLNYQTMITDLTGLPMSNASLLDEGTAAAEAMAMCNNIFKGKK
KTFLIASNCHPQTIDICKTRADGFGIKVETVDLKDIDYKSGDVCGVLVQYPGTEGEILDY
GEFIKNAHAHGVKVVMASDLLALTMLKPPGELGADIVVGSAQRFGVPMGYGGPHAAFLAT
SQEYKRMMPGRIIGVSVDSSGKPALRMAMQTREQHIRRDKATSNICTAQALLANMAAMYA
VYHGPEGLKTIAQRVHGLAGTLAAGVKKIGTVEVQDLPFFDTVKVKCADAKAIADVAYKN
EINLRVVDNNTITVSFDETTTLEDVDNLFKVFALGKPVTFTAQSIAQEVENLIPSGLVRE
TPYLTHQIFNSYHTEHELLRYLHKLQSKDLSLCHSMIPLGSCTMKLNATTEMMPVTWPNF
TNIHPFAPTEQAAGYQEMFKDLGDLLCTITGFDSFSLQPNAGAAGEYAGLMVILAYHMAR
GDHHRNVCIIPVSAHGTNPASAAMCGMKIVAVGTDAKGNINIEELRKAAEANKDKLAALM
VTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGFIGADVCHLNLHKTF
CIPHGGGGPGMGPIGVKKHLAPFLPSHPVVPTGGIPSPDKSQPLGTISAAPWGSALILPI
SYTYIAMMGSKGLTDASKIAILNANYMAKRLEKHYPVLFRGVNGTCAHEFIIDLRGFKNT
AGIEPEDVAKRLIDYGFHGPTMSWPVPGTLMIEPTESESKAELDRFCDALISIREEIAQI
EKGNADINNNVLKGAPHPPSMLMADAWVKPYSREYAAFPAPWLRNAKFWPTTARVDNVYG
DRNLICTLLPVSQMVEEEAAANA

Transcript Sequence

Gene sequence data has not been registered.